About: New variants of porcine epidemic diarrhea virus with large deletions in the spike protein, identified in the United States, 2016-2017

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About: New variants of porcine epidemic diarrhea virus with large deletions in the spike protein, identified in the United States, 2016-2017 Goto Sponge NotDistinct Permalink

An Entity of Type : schema:ScholarlyArticle, within Data Space : covidontheweb.inria.fr associated with source document(s)

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type	Academic Article research paper schema:ScholarlyArticle
isDefinedBy	Covid-on-the-Web dataset
title	New variants of porcine epidemic diarrhea virus with large deletions in the spike protein, identified in the United States, 2016-2017
Creator	Wang, Qiuhong Zhang, Yan Hou, Yixuan Su, Yunfang Prarat, Melanie
source	Medline; PMC
abstract	Four types of porcine epidemic diarrhea virus (PEDV) variants with a large deletion in the spike protein were detected, together with the original US PEDV, from pig fecal and oral fluid samples collected during 2016-2017 in the US. Two of the variants are similar to those identified in Japan: one contains a 194-aa deletion, the same as PEDV variant TTR-2/JPN/2014, while the other contains a 204-aa deletion, the same as PEDV variant JKa-292/CS1de204. Two new S1 NTD-del PEDV variants were found: one contains a 201-aa deletion located at residues 30-230 and the other contains a 202-aa deletion located at residues 24-225 of the S protein. This is the first report on coinfection of S1 NTD-del PEDV variants and the original US PEDV strain in US pigs, indicating that PEDV continues to evolve in pigs and might be responsible for disease pattern changes.
has issue date	2018-05-22(xsd:dateTime)
bibo:doi	10.1007/s00705-018-3874-y
bibo:pmid	29789941
has license	no-cc
sha1sum (hex)	db6474978f00aac2b978510f503ca9f64c52d4a1
schema:url	https://doi.org/10.1007/s00705-018-3874-y
resource representing a document's title	New variants of porcine epidemic diarrhea virus with large deletions in the spike protein, identified in the United States, 2016-2017
has PubMed Central identifier	PMC7087112
has PubMed identifier	29789941
schema:publication	Arch Virol
resource representing a document's body	covid:db6474978f00aac2b978510f503ca9f64c52d4a1#body_text
is schema:about of	named entity 'LARGE' named entity 'NEW' named entity 'IDENTIFIED' named entity 'SAMPLES' named entity 'ORAL FLUID' »more»

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